Gluten cross-reactive foods may be the surprising root cause of your symptoms! If you are diligently following a gluten-free diet yet still experiencing symptoms of gluten exposure such as brain fog, headaches, digestive issues, rashes, weakness, joint pain, swelling, or fatigue then gluten-cross reactivity just might be the issue.
Did you know that there are foods that your body might think are gluten? It’s true! The process is called gluten cross-reactivity. If you eat gluten cross-reactive foods, you may feel all the symptoms of getting “glutened” even if gluten didn’t pass your lips!
In this article, I’ll explain in depth what gluten cross-reactivity is, and share the top gluten-cross reactive foods. Then I’l describe how to tell if it’s causing your symptoms, and what you can do about avoiding gluten cross-reactive foods.
Before we dive in, let me quickly share a tip with you: Complete Enzymes! These digestive enzymes are not a pass to eat anything and everything, yet they’re a huge help in recovering from an occasional “glutening.”
Now. let’s recap why gluten can be so damaging.
What’s so Bad About Gluten?
There are two main reasons why you want to avoid gluten, as well as any gluten cross-reactive foods.
1. Gluten Causes Leaky Gut
When you eat gluten in a piece of bread, in your lunch meats, or in any of the many hidden sources, it travels through your stomach and arrives in your small intestine. We know from the research of Dr. Alessio Fasano1 that gluten then triggers the release of zonulin. Zonulin is a chemical that signals the tight junctions of your intestinal wall to open up, creating intestinal permeability, or leaky gut.
Think of your gut lining as a drawbridge. Teeny tiny boats (micronutrients in food) go under the bridge without a problem. However, when gluten prompts your body to release zonulin, it causes the drawbridge to go up. Bigger boats that were never meant to travel through now have a clear passage. In the case of your gut, it’s microbes, toxins, proteins, and partially digested food particles that pass under the drawbridge, escape into your bloodstream, and travel throughout your body
As all of the toxins, microbes, and food particles such as gluten and gluten cross-reactive foods flood your bloodstream, your immune system marks them as dangerous invaders. It creates inflammation to get rid of them, which leads us to point number two.
2. Gluten Causes Inflammation
Inflammation is your immune system’s natural response to anything it deems dangerous. That could be a cut, a virus, gluten, or gluten cross-reactive food that slipped through your leaky gut. One percent of the population has celiac disease and one in 30 people have a gluten sensitivity. Yet, eating gluten and gluten cross-reactive foods doesn’t just cause inflammation in people with celiac disease and gluten intolerance. The inflammation that stems from a leaky gut caused by gluten and gluten cross-reactivity can happen to anyone.
When your immune system continuously creates inflammation in response to the microbes and toxins flooding your bloodstream through leaky gut caused by gluten and gluten cross-reactive foods, you can develop chronic inflammation. Your immune system becomes overworked. It is less able to attack pathogens and invaders with precision.
Instead, it begins indiscriminately sending wave after wave of attack. This may begin with gluten cross-creative foods. However, eventually, your body’s own tissues can end up on the receiving end of the attack, leading to autoimmune disease. The only way to give your immune system the break it needs to regain its precision is to avoid gluten and gluten cross-reactive foods entirely.
That last word — entirely — is important. Recent research has shown that eating gluten can elevate your gluten antibodies for months.1 So, even if you only ate gluten four times a year, you could be in a state of inflammation year-round. And, at least until your leaky gut is healed and your inflammation has subsided, you’ll also need to avoid gluten cross-reactive foods because your body can’t tell the difference.
How Does Gluten Cross-Reactivity Work?
Let’s dig deeper into this process. Your adaptive immune system makes antibodies. Antibodies target particular bad guys (antigens) that your immune system has decided are likely to do you harm. Once gluten gets tagged as an antigen (as it is in anyone with gluten sensitivity), your adaptive immune system makes antibodies to seek it out.
Unfortunately, your immune system’s recognition system isn’t perfect. As long as a molecule’s structure is similar enough to the one your antibodies are hunting, your immune system can register it as an invader as well.
So while on the hunt for gluten, those antibodies can wrongly tag other proteins as gluten. They recognize specific, short amino acid sequences that are also found in gluten. Your immune system then puts up its defenses, flooding your body with inflammatory chemicals. Your inflammation levels ratchet up.
Are Gluten-Cross Reactivity and Molecular Mimicry the Same?
This process of cross-reactivity is also the same concept as the molecular mimicry phenomenon. In both cases, your immune system confuses benign molecules as invaders and begins to destroy them. However, unlike in gluten cross-reactivity, in the case of molecular mimicry, your body (such as thyroid tissue in those with Hashimoto’s) is being misidentified and attacked.

For more information on how gluten cross-reactivity and molecular mimicry contribute to autoimmunity and thyroid dysfunction, check out my books, The Autoimmune Solution and The Thyroid Connection.
6 Gluten Cross-Reactive Foods
This gluten cross-reactivity happens most commonly with dairy products. That’s because casein, the protein found in dairy, is so similar to the gliadin protein found in gluten. In fact, it’s estimated that at least half of those who are gluten intolerant are also sensitive to dairy. If gluten is an issue for you, it’s likely gluten cross-reactivity will occur with dairy products as well.
Here are the six foods that your body can confuse with gluten because of their similar protein structure:
- Dairy products, such as milk and cheese
- Corn
- Millet
- Oats
- Rice
- Yeast

If you’ve been following the functional medicine or gluten-free community, you may recall that the list of foods believed to cross-react with gluten used to be much longer.
This was based on the fact that the primary lab test (based on research at the time) used to check for gluten cross-reactivity previously included 19 foods. However, new and more conclusive information and research have emerged demonstrating that the list is actually much narrower! The current best practices for lab testing for gluten cross-reactivity have been updated (more on that below).
How to Establish Which Foods Are Causing Your Gluten Cross-Reactivity
If you suspect that gluten cross-reactivity is causing your symptoms, there are two routes you can take to pinpoint which foods may be the culprit.
Option One: Elimination Diet for Gluten Cross-Reactive Foods
I find the best option is to use an elimination diet protocol. Remove the six common gluten cross-reactive foods for at least two months to see if your symptoms improve. Make sure you have healed your gut because you are often more sensitive to certain foods while your gut is leaky and your inflammation is high.
Then, after two months you can reintroduce the six foods one at a time. You’ll do this by eating each food three times a day for three days and monitoring to see if your symptoms return. If you do experience symptoms after reintroducing a food, you are likely experiencing gluten cross-reactivity.
Option Two: Lab Tests for Gluten Cross-Reactive Foods
Lab testing is the second option. I recommended that all of my patients who ditched gluten yet did not go grain, legume, and dairy-free take the Cyrex Array 4 gluten cross-reactivity test, This was particularly important for anyone with any type of autoimmunity. I also recommended this test for anyone who had eliminated gluten from their diet yet was still experiencing the symptoms that point to gluten cross-reactivity.
What to Do if You’re Experiencing Gluten Cross-Reactivity
If you determine that there are foods that are gluten cross-reactive for you, you will want to permanently remove them from your diet. Remember, even though the gluten cross-reactive foods do not actually contain gluten, your body thinks they do. Therefore, they can cause just as much inflammation and damage as eating actual gluten.
I never travel or dine-out without taking a bottle of Complete Enzymes along with me. While they’re not a “free pass” to eat all the gluten you want, they’re a big help when you’re dealing with an accidental exposure or gluten cross-reactivity.
I designed my Complete Enzymes for those of you with digestive issues, food sensitivities, and nutrient absorption challenges. These enzymes break down everything from protein and protein peptides, to carbohydrates, disaccharides and sugars. They even work on lipids/fats, and even vegetable fibers. In fact, I made certain to include DPP-IV. That’s a protease enzyme that actually breaks down gluten! So, if you are accidentally glutened, or experience gluten-cross-reactivity try Complete Enzymes. They can be a great support while you resolve the root cause of the problem.

OK. So I am looking at the list and wondering what the heck I would eat? I am a vegan. It sounds to me like I’d be eating a lot of beans, quinoa and vegetables. Not sure that I could live on those foods alone. I feel best when eating carbs. Any thoughts?
That will be my next blog
Its exactly the same here I’m vegan and mostly rely on green leafy veggies, fruits nuts seeds and legumes. Trying to eliminate the consumption of cereals and to some degree even legumes. After seeing your list I got to wonder how I could survive? Even potatoes :((
Again, if you don’t have an issue with grains or gluten, then this may not be the best fit for you. Every body is different and reacts to foods differently. You can survive off of starchy veggies, non-starchy veggies, healthy fats, nuts, seeds, and fruit.
If you feel better on carbs, then eat carbs. Everyone is different. This article is meant to help gluten-sensitive individuals, who still have symptoms after eliminating gluten.
I’m with you on wondering what is left TO eat. A lot of times when my stomach hurts it feels better to eat some carbs. I am having a hard time with what’s good vs what’s bad for me. Then there’s getting my family to do it with me….
Jennifer, we are all so different and it can really be individualized! Did you know we offer wellness coaching? It’s a great way to ask some questions and get started on a plan without becoming a patient: http://store.amymyersmd.com/shop/phone-consultation-with-registered-dietitian/
On the link for the lab..which tests to have to check for cross reactive culprits?
You want Array 4- Gluten-Associated Cross-Reactive Foods and Foods Sensitivity.
So… the image uses rice as an example of a Non-reactive food, but then rice is included on the reactive list! …is this another case of “depends on who you ask”?
Yes. Some believe that rice is not a reactive food, but I have seen patients who react negatively to rice, so I included it on the list.
I think rice is rarely for problem for people, that is why it is always something one gives to a baby. I have a ton of dietary restrictions now, but still eat Basmati rice and am doing just fine.
I hope you’re careful where your rice is sourced. Rice from overseas (China) is loaded with arsenic.
Theresa, my Basmati rice comes from India.
Basmati rice from Arkansas is also very good. Lots of it is grown in my area and sold at health food stores. Very delicious! !
Why does Chinese rice have arsenic?
I noticed that. I saw the non reactive part and thought, “oh, I can eat rice!”, then it says no. I’m confused.
Celiac disease, I had the same thing, dairy, soy, eggs, peanuts and a few others.. Chicken & beef began to make me sick and then it didn’t matter what I avoided. All foods were making me sick until I was recommended Betazyme by Nutritional Frontiers. Take 1 tab with every meal and finally can eat without getting sick.. Now if you’re like me you still have to avoid food allergies, gluten (due to celiac) soy, eggs & peanuts..
Hope this helps someone out, I know I was on my last straw.
What’s left except fresh fruits & veggies? Ugh
Everyone needs fresh fruits and veggies!
True, however, I have oral allergy syndrome, and I am allergic to many fresh fruits, vegetables and some nuts (itching in mouth, hives, laryngitis, etc.) whereas, if the veggies/fruits are processed or cooked, I am not allergic… I am dairy free and gluten free (recently) but my allergies to fresh stuff seems to be getting worse…
I am unable to have most fruits & vegetables, as well as a lot of other foods already : now having to lose gluten as well, what am I to survive on if things like rice & potatoes are also out?
This isn’t a list of things you absolutely have to avoid, this is a list of foods that could potentially be a problem if you are sensitive to gluten. If you do fine with these foods, that’s great! Also, as the gut heals, a lot of foods can be reintroduced.
Have you considered the prospect of SBBO and the effect this has on the immune system and mucosal wall?
With regards to your website, I would perhaps review the wording, as it appears some of the above comments are getting a little confused by your conflicting advice.
Good luck.
Yes I have several articles on the subject: http://www.amymyersmd.com/2013/09/26/10-signs-you-have-small-intestinal-bacterial-overgrowth-sibo/
Do you have a link to an actual study or is this all heresay?
http://www.scirp.org/journal/PaperInformation.aspx?PaperID=26626#.VCXVd2RdWPc
I hear you all…I am vegan as well with gluten sensitivity plus oat and soy! As a MS student of Human nutrition and Functional Medicine and as a patient I can only tell you that Dr. Amy knows what she is writing about we just need to live with it. :( Find out which is the offending food and give it up!
Yes and let’s not forget that there is a HUGE variety of plant foods you can eat as a vegan! It can be done :)
If chocolate cross reacts with gluten, does that mean raw cacao also cross reacts?
There is good news if you go to the primary source… I believe that Dr. Myers has simplified the findings so that people can look further into it and make individualized decisions. For example, in this specific study, “coffee” is actually instant coffee, and 3 different espressos and “imported” coffee did not have the same cross-reactivity. In fact, they had none. Similarly, the “chocolate” listed here was actually milk chocolate in the study. It makes sense that milk chocolate is cross-reactive since milk is. Cocoa itself and dark chocolate had no cross-reactivity. Furthermore, the authors state: “immune reactions against oat cultivar #1, sesame, buckwheat, sorghum, hemp, amaranth, quinoa, tapioca, teff, soy, egg, and potatoes were less than 1 SD above the mean of the ELISA background OD,” meaning that the reactions to those foods should not be considered statistically significant. See? The list is getting shorter! It is worth looking more closely into the actual research and deciding what resonates with your particular body before going off all of these foods cold-turkey.
Hi Dr. Myers!
I wanted to clear something up- not all 19 foods on Array 4 are gluten cross-reactors. If you look at the technical manual for the array, it breaks them into cross-reactors and foods that are commonly introduced on a gluten-free diet that may become sensitivities due to their consumption in the face of a permeable gut. There is a lot of misunderstanding about this.
The currently identified list of cross-reactors are (per Nora Gedgaudas, who asked Cyrex directly):
Rye, barley, spelt, Polish wheat/Kamut
Cow’s Milk
Alpha-casein and beta-casein
Casomorphin
Milk butyrophilin
Whey protein
Milk chocolate
Oats
Baker’s Yeast
Pre-ground and Instant coffee
Millet
Corn
Rice
I hope this helps to clarify things!
Dear Dr. Myers,
As I read your article I was amazed at some of the strange misinformation.
Firstly, wheat is wheat is wheat, and it doesn’t matter what strain it is, it is
going to give a Celiac sufferer problems. What person with CD, in
their right mind, would eat Polish wheat? The gliadin is present and
that is forbidden to us.
Regarding coffee ~ It was recently brought out in the news that problems with growing coffee have caused unscrupulous growers to add ground wheat and dirt to the pre-ground coffee. Based on that knowledge can we be 99.9 percent
certain as to why the test subjects reacted to the pre-ground and instant coffee?
If eating milk chocolate caused a reaction, and eating dark chocolate did not, might we then assume (based on your list) that milk was the culprit? Many of us are known to be lactose intolerant. As for me, milk and any milk product will produce very similar reaction to Gluten intolerance because I can’t digest lactose.
In reading over the other comments it seems that quite a few of us really
want to know about the rice. Is it a non-reactive agent or not? Please clear that up for us.
And finally, prior to biopsy diagnosis of Celiac I had been allergy tested for everything. Turns out I was allergic to everything I loved to eat. Symptoms for food
allergy were gut trouble and sinus issues. After I found out I had Celiac and healed my gut, I then reintroduced much of the food I had previously been allergic to. The great news was that out of over 100 foods I reacted to, I can now eat most of what was on my list of allergy inducing foods again. (Though peanuts, peaches, artichokes and carrots can still hurt me. Can’t win them all.)
I am not trying to be a troll, but I do feel that more investigation is in order and some clarifications need to be made here.
Thank you for clarifying,
Lynda
Just purchased the new Myer’s Way book, and am strictly following it (as well as the candida portion) but I noticed that so far nuts such as almonds and walnuts haven’t been specifically addressed. I know legumes aren’t supposed to be consumed but technically almonds and walnuts aren’t considered legumes – just peanuts. Are almonds walnuts and their products ok to consume?
doing the 30 day protocol…..is it okay to drink decaf green tea and herbal teas? Also is dil and ashagawana ok? My doc has me dating a…drenal, that includes ashagawanda.
Yes you can drink tea without caffeine. Ashwagandha is a nightshade, so it’s best avoided. I carry an adrenal supplement in my online store that does not contain ashwagandha: http://store.amymyersmd.com/shop/adrenomend/